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Are you looking to enhance your skills and take your career to the next level? Look no further than our Molecular Docking Certification Course! This comprehensive course is designed to equip you with the knowledge and expertise to excel in the field of molecular docking.

Ratings:

4.7
4.7

Students Enrolled: 4721

Created By: Dr. Nikita Bora, Ph.D.

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17 out of 20 Enrolled Already

This Online Course Includes

What You'll Learn

Who Is This For

This course is suitable for currently enrolled students or pass-out students.

About This Course

Our course covers the latest techniques and best practices, ensuring that you stay ahead of the competition.  With our expert instructors guidance, you’ll learn how to use cutting-edge tools and software to model the interaction between small molecules and protein targets. You’ll also gain hands-on experience through our practical  exercises videos.

Don’t let a lack of certification hold you back any longer. Our program is perfect for aspiring researchers, graduate students, and industry professionals looking to upskill. Plus, with our flexible online format, you can learn at your own pace and on your own schedule.

Certification

All the participants will receive certificates on successful completion of training.

Interesting and complete course with the fundamentals and some exercises regarding molecular docking.

Edwing Sedano

Unlock the Potential of Molecular Docking

Enroll in Our Certificate Course Today!

Don't miss this opportunity to gain the knowledge and skills needed to excel in the field of molecular docking and drug discovery. Enroll today and start your journey to a career in this exciting and rapidly growing field!

Register Now

Course Content

    • 1.1 Introduction to moleuclar docking 00:13:00
    • 1.2 Understanding the structure of protein 00:07:00
    • 1.3 Understanding the active site of a protein 00:08:00
    • 1.4 Understanding the ligand structure 00:06:00
    • 1.5 Protein ligand interactions 00:06:00
    • 2.1 Drug design 00:14:00
    • 2.2 Shift from traditional to computational biology 00:07:00
    • 2.3 Computer aided design and drafting 00:14:00
    • 2.4 Structure based drug design 00:15:00
    • 2.5 Virtual screening 00:17:00
    • 2.6 Structure based virtual screening 00:08:00
    • 2.7 Work-flow of multi-stage drug designing 00:16:00
    • 3.1 Workflow of molecular docking 00:14:00
    • 3.2 Molecular docking theory 00:21:00
    • 3.3 Ligand induced conformation 00:19:00
    • 3.4 Ligand poses 00:08:00
    • 3.5 Binding affinity 00:04:00
    • 3.6 Molecular docking task 00:06:00
    • 3.7 Molecular docking programs 00:07:00
    • 4.1 Types of biomolecular reactions 00:07:00
    • 4.2 Protein ligand docking 00:19:00
    • 4.3 Protein ligand docking example 00:05:00
    • 4.4 Protein-Protein docking 00:20:00
    • 4.5 Protein-Protein docking examples 00:26:00
    • 4.6 Protein-Peptide docking 00:15:00
    • 4.7 Protein-Peptide docking example 00:03:00
    • 4.8 Protein-DNA docking 00:24:00
    • 4.9 Protein-RNA docking 00:25:00
    • 4.10 Example 00:04:00
    • 4.11 HADDOCK 00:05:00
    • 5.1 Modes of molecular docking 00:05:00
    • 5.2 Rigid docking 00:16:00
    • 5.3 Illustration of rigid docking and its process 00:15:00
    • 5.4 Shifting towards flexible mode of docking 00:14:00
    • 5.5 Semi-Flexible docking 00:08:00
    • 5.6 Flexible Ligand, Rigid Protein 00:06:00
    • 5.7 Flexible docking – explanation 00:11:00
    • 5.8 Flexible docking-concept 00:14:00
    • 5.9 Flexibility of protein in drug discovery 00:08:00
    • 5.10 Example 1- CABS Dock 00:13:00
    • 5.11 Example 2 00:06:00
    • 5.12 Challenges of protein ligand docking 00:07:00
    • 5.13 Example 3 00:06:00
    • 6.1 Sampling algorithms – Introduction 00:03:00
    • 6.2 Semi-flexible docking- types 00:04:00
    • 6.3 Systematic search techniques 00:14:00
    • 6.4 Fragmentation search 00:14:00
    • 6.5 Conformational Ensemble 00:17:00
    • 6.6 Monte Carlo method 00:13:00
    • 6.7 Genetic algorithms 00:21:00
    • 6.8 Tabu search method 00:08:00
    • 6.9 Swarm optimization method 00:06:00
    • 6.10 Simulation method- molecular dynamics (example) 00:21:00
    • 6.11 Sampling Algorithms for flexible docking 00:10:00
    • 6.12 Soft Docking (examples) 00:15:00
    • 6.13 Side chain flexibility 00:17:00
    • 6.14 Multiple protein conformations 00:00:16
    • 6.15 Average grid method 00:05:00
    • 6.16 United description of the protein 00:13:00
    • 6.17 Individual conformations 00:15:00
    • 7.1 Pose selection (scoring functions) 00:13:00
    • 7.2 Scoring function components 00:09:00
    • 7.3 Classification of scoring function 00:21:00
    • 7.4 Empirical scoring fuctions 00:12:00
    • 7.5 Descriptors used in empirical scoring function 00:23:00
    • 7.6 Knowledge based scoring fuctions 00:17:00
    • 7.7 Evaluation scoring functions 00:12:00
    • 7.8 Databases for evaluating scoring functions 00:14:00
    • 7.19 Practical Session 1 01:00:00
    • 8.1 Understanding the structure file format- introduction 00:18:00
    • 8.2 Types of records in PDB 00:10:00
    • 8.3 Practical Session 2 01:00:00
    • 8.4 Docking target – handling the protein structure 00:28:00
    • 8.5 Prediction of active site & missing residues 00:15:00
    • 8.6 Practical Session 3- Prediction of active site & modeling missing residues 00:49:00
    • 8.7 Practical Session 4-Molecular Visualization Tool- Chimera 00:01:00
    • 9.1 Selecting the traget molecule 00:26:00
    • Practical Session – 5 00:15:00
    • 9.3 Practical session – 6 UniProtDB for receptor protein 00:28:00
    • 10.1 Practical Session 7 00:10:00
    • 10.2 Practical Session – 8 PubChem 01:00:00
    • AutoDoc Practical Session – 9 02:00:00
    • 12.1 Preparing the Protein – Practical Session 10 01:00:00
    • 12.2 Generating the grid parameter file – Practical Session 12 00:50:00
    • 12.3 Ligand molecule preparation – Practical Session 13 00:30:00
    • 12.4 Docking – Practical Session 14 00:51:00
    • 12.5 Analysis – Practical Session 15 00:53:00
    • 12.6 Analysis of the docked complex – Practical Session 16 00:55:00
    • 12.7 Molecular docking softwares 01:00:00
    • Applications of Molecular Docking 00:01:00

Reviews

4.7

4.7
59 ratings
  • 5 stars46
  • 4 stars11
  • 3 stars2
  • 2 stars0
  • 1 stars0
  1. Amazing Course

    5

    The in-depth knowledge gained by completing this course is immense. I would suggest every individual to take this course. This will not just teach docking but all other aspects related to it.

  2. Best Molecular Docking Course

    5

    Best Course.

  3. BEST DOCKING SIMPLIFIED COURSE

    5

    best course

  4. useful

    5

    It was a very useful course. Practical sessions were more interesting.

  5. Great support for my Ph.D

    5

    My research is on docking and this curriculum from Biogrademy has helped me in ways unimaginable. Very user friendly and academically-sound

  6. Autodock

    5

    Very informative

  7. Utkarsh MishraJune 14, 2023 at 4:48 PM

    Perfect combo course

    5

    Good and Informative course

  8. Review

    5

    The course was very well designed and it helped me to understand different aspects of molecular docking and it’s applications.Thank you!

  9. I have reviewed and rated 5 stars

    5

    It was a useful course that helped me to learn more about the process in a virtual mode.

  10. auto dock

    5

    Its really helpful for undustanding the steps and all the conversation

  11. Priyabati ChoudhuryMay 2, 2023 at 7:07 PM

    Very Informative Course

    5

    Informative course

  12. Applications of molecular docking

    5

    Very informative videos….got to know a lot through this course

  13. Amardeep KumarApril 8, 2023 at 3:01 AM

    Helpfull

    5

    Good class

  14. extremely great course a must do

    5

    explanation of every unit was just remarkable

  15. Pranab Ranjan MallikMarch 27, 2023 at 1:20 PM

    Good

    5

    Helpful and understandable

  16. Good one

    5

    Giod course

  17. A appealing course and masterpiece for Docking field

    5

    As a Chemist myself, at the beginning, I thought the course is slow-paced. As the course led on to its main elements one can understand how well the course is being explained and presented. A student can easily understand and perform a successful docking whilst listening to the course. The sheer delight I got when the results of my first Docking came out was a moment of pure joy and the course is really worth its time.

  18. Very broad explanations and up to date info

    5

    Interesting and complete course with the fundamentals and some exercises regarding molecular docking.

  19. Well deserved

    5

    Very informative session

  20. Excellent

    5

    The overall content about the topi is sufficient enough to to clear all the concepts and it enhanced my skills

  21. Molecular docking

    5

    It one of the important topic in drugs design. In this course, tutor has explained very clearly in detail. After completing this course one can easily conduct molecular docking with there own. I highly recommend this course. Lastly, my great thankful to tutor for designing and explaining this course in easiest way.

  22. Awesome Course

    5

    GOod Content to Learn

  23. Detailed Course

    5

    Nice explanation

  24. molecular docking

    5

    Extraordinary lesson and teaching,great learning experience.

  25. Autodock course

    5

    This is an outstanding course.

  26. Explanation

    5

    Really nice n proper

  27. Better understanding program

    5

    It helps in both side like theoretical and practical

  28. Tasnim BaldiwalaOctober 4, 2022 at 1:37 PM

    Molecular docking

    5

    Excellent

  29. Molecular docking

    5

    It’s really good 👍

  30. Knowledgeable

    5

    Clearly understood the molecular docking

  31. course content

    5

    Whole course content was very good and easy to understand

  32. Introduction of molecular docking

    5

    Good presentation and easy to understand

  33. A very detailed Course

    5

    The course was detailed and covered every aspect of molecular docking. I’m grateful to Dr. Nikita Bora for such an interesting course and practical sessions.

  34. Informative

    5

    Enjoyed my first module

  35. Molecular Docking

    5

    Very informative for my UG project work

  36. ANGARAG KASHYAPJuly 30, 2022 at 6:52 PM

    AUTODOCK

    5

    It’s very helpful

  37. MUTAZ MOHAMMED ABDALLAH ADAMJuly 24, 2022 at 7:56 PM

    Molecular docking certificate course

    5

    very informative course

  38. Excellent course

    5

    The course was excellent. the course has given the idea about CADD and its future scope. this is very helpful for me always. thank you for such good work.

  39. Tahreen Rafi

    5

    Slides are amazing and the classes are all good with great examples

  40. Impressive course content

    5

    The course content seems very comprehensive.

  41. Helpful

    5

    The course was interesting and also helpful

  42. Dr.BINAYAK BIBEK DASApril 12, 2022 at 5:16 AM

    Moleculars

    5

    Grt, superb

  43. SANDRA ELIZA SAJIApril 11, 2022 at 2:07 PM

    Good course

    5

    It was a very informational experience. I have learned a lot about molecular docking.

  44. Bushan Kumar ParameswaraMarch 31, 2022 at 9:13 AM

    Informative and well done

    5

    Very nice slides and explanation done for every topic. Very Good course.

  45. Jaime Andrés Úsuga RestrepoFebruary 21, 2022 at 10:31 PM

    Review

    5

    Great course!

  46. Rishi Nandan GargJanuary 8, 2022 at 3:03 PM

    Great learning

    5

    Very informative sessions

  47. Jyoti VishwakarmaJuly 14, 2023 at 1:26 AM

    Molecular docking

    4

    Its really helpful

  48. Docking

    4

    Very Nice Course. Will suggest others too. Very informative

  49. Nikita SaraswatApril 28, 2023 at 1:36 PM

    Molecular Docking

    4

    really helpful set of lessons in the drug design field

  50. Molecular docking

    4

    Very informative, professional course

  51. Knowledge

    4

    Enhanced knowledge

  52. good

    4

    it was an excellent course as i got the insights of molecular docking in detail.

  53. Mr. Shailesh GuravJanuary 29, 2023 at 9:25 AM

    Good

    4

    Good lecture

  54. Awesome presentation....

    4

    Over all presentation was good..slow steady informative from basic to indepth information about docking…thank you 😊

  55. Molecular docking

    4

    It was a great experience with this course. The content was very much informative and the pace of teaching was optimum.

  56. SHIFRA SARA SAJIApril 11, 2022 at 8:04 AM

    Molecular Docking Review

    4

    Good course. The course was helpful and informative. Thank you…

  57. Keerthi ChikmathJanuary 28, 2022 at 7:33 PM

    Molecular docking

    4

    Very detailed explanation was provided and the concepts were easy and understandable

  58. Madhu Tanya SinghMay 20, 2023 at 10:28 AM

    Docking

    3

    For theory explanation, it is good coming to the software the video was prolonged and vast description. There is much easy software available if the speaker explains about that software it would be beneficial. The output data of docking did not explain clearly. If the speaker takes one published article and explains the results and terminology it would be very helpful. I expected Video on MD simulations if the MD simulations video is available we ll get a clear idea on complete CADD.

  59. Sushmita SushmitaAugust 28, 2022 at 6:28 PM

    It's Okay initially

    3

    The course can be more focussed on practical aspects which includes the how to select ligand and protein,main factors to be focussed on with more time being provided by doing that on softwares discussed, instead of giving more time in explaining how to download the softwares

Interesting and complete course with the fundamentals and some exercises regarding molecular docking.

Edwing Sedano

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